51543905 + 0 in total (QC-passed reads + QC-failed reads) 50781080 + 0 primary 0 + 0 secondary 762825 + 0 supplementary 0 + 0 duplicates 0 + 0 primary duplicates 51533785 + 0 mapped (99.98% : N/A) 50770960 + 0 primary mapped (99.98% : N/A) 50781080 + 0 paired in sequencing 25390540 + 0 read1 25390540 + 0 read2 49591452 + 0 properly paired (97.66% : N/A) 50770634 + 0 with itself and mate mapped 326 + 0 singletons (0.00% : N/A) 351302 + 0 with mate mapped to a different chr 318209 + 0 with mate mapped to a different chr (mapQ>=5)