68374 + 0 in total (QC-passed reads + QC-failed reads) 68150 + 0 primary 0 + 0 secondary 224 + 0 supplementary 0 + 0 duplicates 0 + 0 primary duplicates 19703 + 0 mapped (28.82% : N/A) 19479 + 0 primary mapped (28.58% : N/A) 68150 + 0 paired in sequencing 34075 + 0 read1 34075 + 0 read2 19060 + 0 properly paired (27.97% : N/A) 19144 + 0 with itself and mate mapped 335 + 0 singletons (0.49% : N/A) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)