63646 + 0 in total (QC-passed reads + QC-failed reads) 61610 + 0 primary 0 + 0 secondary 2036 + 0 supplementary 0 + 0 duplicates 0 + 0 primary duplicates 62107 + 0 mapped (97.58% : N/A) 60071 + 0 primary mapped (97.50% : N/A) 61610 + 0 paired in sequencing 30805 + 0 read1 30805 + 0 read2 59466 + 0 properly paired (96.52% : N/A) 59982 + 0 with itself and mate mapped 89 + 0 singletons (0.14% : N/A) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)