68697 + 0 in total (QC-passed reads + QC-failed reads) 68150 + 0 primary 0 + 0 secondary 547 + 0 supplementary 0 + 0 duplicates 0 + 0 primary duplicates 20015 + 0 mapped (29.14% : N/A) 19468 + 0 primary mapped (28.57% : N/A) 68150 + 0 paired in sequencing 34075 + 0 read1 34075 + 0 read2 18998 + 0 properly paired (27.88% : N/A) 19124 + 0 with itself and mate mapped 344 + 0 singletons (0.50% : N/A) 0 + 0 with mate mapped to a different chr 0 + 0 with mate mapped to a different chr (mapQ>=5)