Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -S final -d /mnt/storage/home/manuriddinov/scratch/fastq/MERY/NR -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/mm10/mm10.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/MERY/NR -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU Unique Reads: 101,067,149 PCR Duplicates: -101,067,149 Optical Duplicates: 0 Library Complexity Estimate: 0 Intra-fragment Reads: 2,894,584(2.86%) Below MAPQ Threshold: 13,906,537(13.76%) Hi-C Contacts: 84,266,028(83.38%) Ligation Motif Present: 40,447,482 (40.02%) 3' Bias (Long Range): 72% - 28% Pair Type %(L-I-O-R): 25% - 25% - 25% - 25% Inter-chromosomal: 39,096,728 (38.68%) Intra-chromosomal: 45,169,300 (44.69%) Short Range (<20Kb): 14,539,299 (14.39%) Long Range (>20Kb): 30,629,931 (30.31%)