Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O15 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O15 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  4,473,307
 Normal Paired: 70,951 (1.59%)
 Chimeric Paired: 4,078 (0.09%)
 Chimeric Ambiguous: 2,967 (0.07%)
 Unmapped: 4,395,311 (98.26%)
 Ligation Motif Present: 2,198,075 (49.14%)
Alignable (Normal+Chimeric Paired): 75,029 (1.68%)
Unique Reads: 69,612 (1.56%)
PCR Duplicates: 5,417 (0.12%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 494,277
Intra-fragment Reads: 34,334 (0.77% / 49.32%)
Below MAPQ Threshold: 13,129 (0.29% / 18.86%)
Hi-C Contacts: 22,149 (0.50% / 31.82%)
 Ligation Motif Present: 18,639  (0.42% / 26.78%)
 3' Bias (Long Range): 67% - 33%
 Pair Type %(L-I-O-R): 25% - 23% - 25% - 28%
Inter-chromosomal: 427  (0.01% / 0.61%)
Intra-chromosomal: 21,722  (0.49% / 31.20%)
Short Range (<20Kb): 21,319  (0.48% / 30.63%)
Long Range (>20Kb): 403  (0.01% / 0.58%)