Experiment description: Juicer version 1.5.6;6 threads; java version "1.8.0_45"; /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU/juicer.sh -t 6 -d /mnt/storage/home/manuriddinov/scratch/fastq/O/O17 -b GATC -p /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.chr.sizes -y /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.MboI.juicer.txt -z /mnt/storage/home/manuriddinov/MyData/Vertebrates/genome/galGal5/galGal5.fa -o /mnt/storage/home/manuriddinov/scratch/Vertebrates/O/O17 -D /mnt/storage/home/manuriddinov/Distributive/juicer-master/CPU                                                                                                                                                                                                                                                                                                                                                                                                               
Sequenced Read Pairs:  7,619,124
 Normal Paired: 6,745,321 (88.53%)
 Chimeric Paired: 330,894 (4.34%)
 Chimeric Ambiguous: 64,525 (0.85%)
 Unmapped: 478,384 (6.28%)
 Ligation Motif Present: 3,517,153 (46.16%)
Alignable (Normal+Chimeric Paired): 7,076,215 (92.87%)
Unique Reads: 6,378,591 (83.72%)
PCR Duplicates: 697,624 (9.16%)
Optical Duplicates: 0 (0.00%)
Library Complexity Estimate: 33,488,436
Intra-fragment Reads: 3,364,030 (44.15% / 52.74%)
Below MAPQ Threshold: 65,788 (0.86% / 1.03%)
Hi-C Contacts: 2,948,773 (38.70% / 46.23%)
 Ligation Motif Present: 2,624,417  (34.45% / 41.14%)
 3' Bias (Long Range): 70% - 30%
 Pair Type %(L-I-O-R): 24% - 26% - 26% - 24%
Inter-chromosomal: 14,992  (0.20% / 0.24%)
Intra-chromosomal: 2,933,781  (38.51% / 45.99%)
Short Range (<20Kb): 2,875,541  (37.74% / 45.08%)
Long Range (>20Kb): 58,240  (0.76% / 0.91%)