Experiment description: O124
Sequenced Read Pairs:  5,563,183
 Normal Paired: 843,033 (15.15%)
 Chimeric Paired: 606,923 (10.91%)
 Chimeric Ambiguous: 232,301 (4.18%)
 Unmapped: 3,880,926 (69.76%)
 Ligation Motif Present: 1,892,044 (34.01%)
Alignable (Normal+Chimeric Paired): 1,449,956 (26.06%)
Unique Reads: 602,424 (10.83%)
PCR Duplicates: 305,168 (5.49%)
Optical Duplicates: 542,364 (9.75%)
Library Complexity Estimate: 1,026,186
Intra-fragment Reads: 44,279 (0.80% / 7.35%)
Below MAPQ Threshold: 43,280 (0.78% / 7.18%)
Hi-C Contacts: 514,865 (9.25% / 85.47%)
 Ligation Motif Present: 259,604  (4.67% / 43.09%)
 3' Bias (Long Range): 74% - 26%
 Pair Type intra chrom %(L-I-O-R): 16% - 51% - 16% - 16%
 Pair Type inter chrom %(L-I-O-R): 23% - 25% - 27% - 25%
 DE: 34%
 Cis/all (FF and RR orient): 99.8%
Inter-chromosomal: 649  (0.01% / 0.11%)
Intra-chromosomal: 514,216  (9.24% / 85.36%)
Short Range (<20,000bp): 318,596  (5.73% / 52.89%)
Long Range (>20,000bp): 195,620  (3.52% / 32.47%)