Experiment description: O68
Sequenced Read Pairs:  3,510,360
 Normal Paired: 1,072,259 (30.55%)
 Chimeric Paired: 663,832 (18.91%)
 Chimeric Ambiguous: 327,313 (9.32%)
 Unmapped: 1,446,956 (41.22%)
 Ligation Motif Present: 1,542,697 (43.95%)
Alignable (Normal+Chimeric Paired): 1,736,091 (49.46%)
Unique Reads: 615,668 (17.54%)
PCR Duplicates: 1,114,206 (31.74%)
Optical Duplicates: 6,217 (0.18%)
Library Complexity Estimate: 664,993
Intra-fragment Reads: 73,087 (2.08% / 11.87%)
Below MAPQ Threshold: 61,389 (1.75% / 9.97%)
Hi-C Contacts: 481,192 (13.71% / 78.16%)
 Ligation Motif Present: 211,314  (6.02% / 34.32%)
 3' Bias (Long Range): 73% - 27%
 Pair Type intra chrom %(L-I-O-R): 16% - 54% - 15% - 16%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 35%
 Cis/all (FF and RR orient): 91.0%
Inter-chromosomal: 28,425  (0.81% / 4.62%)
Intra-chromosomal: 452,767  (12.90% / 73.54%)
Short Range (<20,000bp): 305,710  (8.71% / 49.66%)
Long Range (>20,000bp): 147,057  (4.19% / 23.89%)