| Parent directory/ | - | - |
| splits_1/ | - | 2024-Aug-14 10:16 |
| apa_results/ | - | 2024-Aug-14 10:51 |
| aligned_1/ | - | 2024-Aug-15 14:16 |
| splits_old_12_border/ | - | 2024-Aug-17 15:07 |
| aligned_old_12_border/ | - | 2024-Aug-18 06:29 |
| fastq/ | - | 2024-Aug-18 15:43 |
| splits/ | - | 2024-Aug-18 16:50 |
| TA5/ | - | 2024-Aug-19 13:12 |
| aligned/ | - | 2024-Aug-19 14:01 |
| db/ | - | 2024-Aug-23 13:25 |
| genes_for_search/ | - | 2024-Sep-03 13:10 |
| blast_out_xml/ | - | 2024-Sep-06 12:47 |
| genome/ | - | 2024-Sep-10 13:11 |
| 100000bp_hic/ | - | 2024-Sep-13 14:12 |
| H3K27me3/ | - | 2024-Sep-17 13:50 |
| H3K27ac/ | - | 2024-Sep-19 08:56 |
| H3K4me3/ | - | 2024-Sep-19 10:06 |
| H3K9me3/ | - | 2024-Sep-19 11:56 |
| T1/ | - | 2024-Oct-16 15:43 |
| 1k_cool/ | - | 2025-Jan-30 17:40 |
| LADs/ | - | 2025-Jul-02 21:21 |
| 100k_cool/ | - | 2025-Jul-03 20:40 |
| pacbio/ | - | 2025-Aug-19 11:21 |
| average_loop/ | - | 2025-Nov-02 12:05 |
| average_TAD_normalized_change/ | - | 2025-Nov-02 12:05 |
| dist_average_loop_100k_10Mb/ | - | 2025-Nov-02 12:05 |
| trash/ | - | 2025-Nov-02 12:05 |
| tmp/ | - | 2025-Nov-02 12:05 |
| ratio_trans_contacts/ | - | 2025-Nov-02 12:05 |
| saddle_strength_plots/ | - | 2025-Nov-02 12:05 |
| saddle_strength_plots_trans/ | - | 2025-Nov-02 12:05 |
| new_hic_data/ | - | 2025-Nov-02 12:05 |
| rabl_structure_sum_normalized/ | - | 2025-Nov-02 12:05 |
| insulation_score/ | - | 2025-Nov-02 12:05 |
| condensin_degron_hic/ | - | 2025-Nov-02 12:05 |
| expr_comp/ | - | 2025-Nov-02 12:05 |
| merged_10k_19chr/ | - | 2025-Nov-02 12:05 |
| p_s_plot_1_to_7_new/ | - | 2025-Nov-02 12:05 |
| Control/ | - | 2025-Nov-02 12:05 |
| ncaph1_merged_comp/ | - | 2025-Nov-02 12:05 |
| rnaseq/ | - | 2025-Nov-02 12:05 |
| raw_hic_data/ | - | 2025-Nov-02 12:05 |
| dist_average_loop/ | - | 2025-Nov-02 12:05 |
| singleCell/ | - | 2025-Nov-02 12:05 |
| dist_average_loop_100k_1100k/ | - | 2025-Nov-02 12:05 |
| average_TAD_change/ | - | 2025-Nov-02 12:05 |
| Trihoplax/ | - | 2025-Nov-02 12:05 |
| ctcf_gimme/ | - | 2025-Nov-02 12:05 |
| merged_replicas_1k/ | - | 2025-Nov-02 12:05 |
| histone_locus/ | - | 2025-Nov-02 12:05 |
| condensin_degron/ | - | 2025-Nov-02 12:05 |
| merged_replicas/ | - | 2025-Nov-02 12:05 |
| saddle_plots/ | - | 2025-Nov-02 12:05 |
| average_TAD_normalized/ | - | 2025-Nov-02 12:05 |
| average_TAD/ | - | 2025-Nov-02 12:05 |
| final_plots/ | - | 2025-Nov-02 12:05 |
| mcph_ko_rad21__rad21/ | - | 2025-Nov-02 12:05 |
| ncaph2_merged_comp/ | - | 2025-Nov-02 12:05 |
| rablStructure/ | - | 2025-Nov-02 12:05 |
| average_loop_normalized/ | - | 2025-Nov-02 12:05 |
| H3K4me3.bed | 3.5 MiB | 2016-Apr-29 02:21 |
| H3K27ac.bed | 5.8 MiB | 2016-Apr-29 05:40 |
| juicebox_assembly_converter.py | 37.8 KiB | 2024-Jun-01 10:27 |
| TA3_S23_R1.fastq.gz | 82.5 MiB | 2024-Aug-14 09:43 |
| TA3_S23_R2.fastq.gz | 85.3 MiB | 2024-Aug-14 09:43 |
| triadV2_030816_SP.mnd.txt | 52 B | 2024-Aug-15 15:27 |
| triadV2_030816_SP.0.cprops | 15.4 KiB | 2024-Aug-15 15:27 |
| triadV2_030816_SP.cprops | 15.4 KiB | 2024-Aug-15 15:27 |
| triadV2_030816_SP.0.asm | 2.7 KiB | 2024-Aug-15 15:30 |
| triadV2_030816_SP.0_asm.scaffold_track.txt | 86.6 KiB | 2024-Aug-15 15:30 |
| triadV2_030816_SP.0_asm.superscaf_track.txt | 68.8 KiB | 2024-Aug-15 15:30 |
| triadV2_030816_SP.0.assembly | 18.7 KiB | 2024-Aug-15 15:30 |
| triadV2_030816_SP.0.hic | 45.5 MiB | 2024-Aug-15 15:32 |
| triadV2_030816_SP.split.cprops | 15.8 KiB | 2024-Aug-15 15:35 |
| triadV2_030816_SP.split.asm | 2.7 KiB | 2024-Aug-15 15:36 |
| triadV2_030816_SP.split_asm.scaffold_track.txt | 87.8 KiB | 2024-Aug-15 15:37 |
| triadV2_030816_SP.split_asm.superscaf_track.txt | 69.9 KiB | 2024-Aug-15 15:37 |
| triadV2_030816_SP.split.hic | 45.5 MiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.final.cprops | 15.8 KiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.split.assembly | 19.2 KiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.rawchrom.cprops | 15.8 KiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.final.asm | 2.7 KiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.rawchrom.asm | 2.7 KiB | 2024-Aug-15 15:38 |
| triadV2_030816_SP.final.assembly | 19.2 KiB | 2024-Aug-15 15:40 |
| triadV2_030816_SP.rawchrom.assembly | 19.2 KiB | 2024-Aug-15 15:40 |
| triadV2_030816_SP.rawchrom_asm.superscaf_track.txt | 70.0 KiB | 2024-Aug-15 15:40 |
| triadV2_030816_SP.rawchrom_asm.scaffold_track.txt | 87.8 KiB | 2024-Aug-15 15:40 |
| triadV2_030816_SP.rawchrom.hic | 45.5 MiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.final.hic | 45.5 MiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.rawchrom.fasta | 101.0 MiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.final.fasta | 101.0 MiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.FINAL.assembly | 19.9 KiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.FINAL.fasta | 101.0 MiB | 2024-Aug-15 15:41 |
| triadV2_030816_SP.rawchrom.review.assembly | 43.0 KiB | 2024-Aug-17 14:11 |
| triadV2_030816_SP.rawchrom.review.agp | 119.1 KiB | 2024-Aug-17 14:11 |
| triadV2_030816_SP.rawchrom.review.break_report.txt | 34.5 KiB | 2024-Aug-17 14:11 |
| triadV2_030816_SP.rawchrom.review.bed | 106.6 KiB | 2024-Aug-17 14:11 |
| triadV2_030816_SP.rawchrom.review.fasta | 101.0 MiB | 2024-Aug-17 14:11 |
| scaffolds.txt | 43.8 KiB | 2024-Aug-17 14:11 |
| triadV2_030816_SP_new.fasta | 101.0 MiB | 2024-Aug-17 14:30 |
| triadV2_030816_SP_new.fasta.bwt | 99.7 MiB | 2024-Aug-17 14:32 |
| triadV2_030816_SP_new.fasta.amb | 39.0 KiB | 2024-Aug-17 14:32 |
| triadV2_030816_SP_new.fasta.pac | 24.9 MiB | 2024-Aug-17 14:32 |
| triadV2_030816_SP_new.fasta.ann | 74.3 KiB | 2024-Aug-17 14:32 |
| triadV2_030816_SP_new.fasta.sa | 49.9 MiB | 2024-Aug-17 14:32 |
| triadV2_030816_SP.rawchrom.review.V2.assembly | 43.0 KiB | 2024-Aug-18 07:23 |
| triadV2_030816_SP_new_V2.fasta | 101.0 MiB | 2024-Aug-18 07:26 |
| triadV2_030816_SP_V2_new.fasta | 101.0 MiB | 2024-Aug-18 07:29 |
| triadV2_030816_SP_new_V2.fasta.bwt | 99.7 MiB | 2024-Aug-18 08:01 |
| triadV2_030816_SP_new_V2.fasta.pac | 24.9 MiB | 2024-Aug-18 08:01 |
| triadV2_030816_SP_new_V2.fasta.ann | 69.2 KiB | 2024-Aug-18 08:01 |
| triadV2_030816_SP_new_V2.fasta.amb | 39.0 KiB | 2024-Aug-18 08:01 |
| triadV2_030816_SP_new_V2.fasta.sa | 49.9 MiB | 2024-Aug-18 08:02 |
| triadV2_030816_SP_V2_new.fasta.bwt | 99.7 MiB | 2024-Aug-18 09:56 |
| triadV2_030816_SP_V2_new.fasta.amb | 39.0 KiB | 2024-Aug-18 09:56 |
| triadV2_030816_SP_V2_new.fasta.pac | 24.9 MiB | 2024-Aug-18 09:56 |
| triadV2_030816_SP_V2_new.fasta.ann | 74.3 KiB | 2024-Aug-18 09:56 |
| triadV2_030816_SP_V2_new.fasta.sa | 49.9 MiB | 2024-Aug-18 09:56 |
| Trichoplax.chrom.sizes | 53.3 KiB | 2024-Aug-19 12:54 |
| triadV2_030816_SP.rawchrom.review.V2.assembly.save | 43.0 KiB | 2024-Aug-21 12:47 |
| triadV2_030816_SP_new_V2.fasta.fai | 64.1 KiB | 2024-Aug-21 14:39 |
| triadV2_030816_SP.rawchrom.review.V2.agp | 75.5 KiB | 2024-Aug-21 14:47 |
| triadV2_030816_SP.rawchrom.review.V2.break_repo..> | 34.5 KiB | 2024-Aug-21 14:47 |
| triadV2_030816_SP.rawchrom.review.V2.bed | 68.2 KiB | 2024-Aug-21 14:47 |
| triadV2_030816_SP.rawchrom.review.V2.fasta | 101.0 MiB | 2024-Aug-21 14:47 |
| GeneListTA.xlsx | 10.7 MiB | 2024-Aug-23 08:40 |
| triadV2_030816_SP_V2_new_UPPER.fasta | 101.0 MiB | 2024-Aug-23 08:51 |
| triadV2_030816_SP_V2_new.fasta.fai | 69.2 KiB | 2024-Aug-23 09:44 |
| Data.csv | 31.5 MiB | 2024-Aug-23 10:39 |
| Data_wo_None.csv | 1018.9 KiB | 2024-Aug-23 12:54 |
| Data_wo_None.xlsx | 305.9 KiB | 2024-Aug-23 12:56 |
| TriadITZ_000268.out | 6.2 KiB | 2024-Aug-23 13:30 |
| TriadITZ_000268.xml | 7.4 KiB | 2024-Aug-23 13:33 |
| Data_new.csv | 32.6 MiB | 2024-Sep-03 14:12 |
| frequency.csv | 589.6 KiB | 2024-Sep-03 14:31 |
| gene-scaffold-positions.csv | 497.8 KiB | 2024-Sep-04 06:24 |
| H3K27me3.bed | 827.4 KiB | 2024-Sep-14 12:39 |
| H3K9me3.bed | 2.8 MiB | 2024-Sep-19 11:16 |
| ENCFF533APC.bed | 2.1 MiB | 2024-Nov-26 15:03 |
| G1_G2_earlS.png | 690.7 KiB | 2025-May-28 12:25 |
