WEB-based GEne SeT AnaLysis Toolkit

Translating gene lists into biological insights...

Summary

Result Download

Job summary

  • Enrichment method: ORA
  • Organism: mmusculus
  • Enrichment Categories: geneontology_Biological_Process
  • Interesting list: REP_Homo_vs_REP_Het_padj_0.05_baseMean_over_50_1701175098.txt. ID type: genesymbol
  • The interesting list contains 914 user IDs in which 898 user IDs are unambiguously mapped to 898 unique entrezgene IDs and 16 user IDs can not be mapped to any entrezgene ID.
  • The GO Slim summary are based upon the 898 unique entrezgene IDs.
  • Among 898 unique entrezgene IDs, 768 IDs are annotated to the selected functional categories and also in the reference list, which are used for the enrichment analysis.
  • Reference list: all mapped entrezgene IDs from the selected platform genome
  • The reference list can be mapped to 68167 entrezgene IDs and 18986 IDs are annotated to the selected functional categories that are used as the reference for the enrichment analysis.

Parameters for the enrichment analysis:

  • Minimum number of IDs in the category: 5
  • Maximum number of IDs in the category: 2000
  • FDR Method: BH
  • Significance Level: Top 10

Based on the above parameters, 10 categories are identified as enriched categories and all are shown in this report.

GO Slim summary for the user uploaded IDs

Each Biological Process, Cellular Component and Molecular Function category is represented by a red, blue and green bar, repectively.

The height of the bar represents the number of IDs in the user list and also in the category.

Bar charts of enriched GO Slim terms

Enrichment Results

Redundancy reduction: All Affinity propagation Weighted set cover