Experiment description: ${about}; Juicer version 1.5.6; BWA 0.7.17-r1188; 24 threads; java version "1.8.0_45"; /mnt/storage/home/talagunov/soft/juicer_mir/CPU/juicer.sh -n P244 -g hg38 -D /mnt/storage/home/talagunov/soft/juicer_mir/CPU/ -t 24 -z /mnt/storage/home/talagunov/genomes/references/hg38/hg38.fa -a P244 hg38 -p /mnt/storage/home/talagunov/genomes/references/hg38/hg38.chromsizes -d /mnt/scratch/ws/talagunov/202605181300talagunov24/for_Yana/P244 -s none -x                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
Sequenced Read Pairs:  29,923,450
 Normal Paired: 17,242,311 (57.62%)
 Chimeric Paired: 9,366,513 (31.30%)
 Chimeric Ambiguous: 3,126,913 (10.45%)
 Unmapped: 187,713 (0.63%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 26,608,824 (88.92%)
Unique Reads: 25,902,428 (86.56%)
PCR Duplicates: 86,782 (0.29%)
Optical Duplicates: 619,614 (2.07%)
Library Complexity Estimate: 3,882,916,970
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 4,412,928 (14.75% / 17.04%)
Hi-C Contacts: 21,489,500 (71.81% / 82.96%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 6% - 83% - 6% - 6%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 65%
 Cis/all (FF and RR orient): 53.8%
Inter-chromosomal: 3,466,063  (11.58% / 13.38%)
Intra-chromosomal: 18,023,437  (60.23% / 69.58%)
Short Range (<20,000bp): 14,858,061  (49.65% / 57.36%)
Long Range (>20,000bp): 3,165,376  (10.58% / 12.22%)