Experiment description: ${about}; Juicer version 1.5.6; BWA 0.7.17-r1188; 24 threads; java version "1.8.0_45"; /mnt/storage/home/talagunov/soft/juicer_mir/CPU/juicer.sh -n P245 -g hg38 -D /mnt/storage/home/talagunov/soft/juicer_mir/CPU/ -t 24 -z /mnt/storage/home/talagunov/genomes/references/hg38/hg38.fa -a P245 hg38 -p /mnt/storage/home/talagunov/genomes/references/hg38/hg38.chromsizes -d /mnt/scratch/ws/talagunov/202605181300talagunov24/for_Yana/P245 -s none -x                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
Sequenced Read Pairs:  40,385,193
 Normal Paired: 27,948,974 (69.21%)
 Chimeric Paired: 9,557,180 (23.67%)
 Chimeric Ambiguous: 2,713,420 (6.72%)
 Unmapped: 165,619 (0.41%)
 Ligation Motif Present: 0 (0.00%)
Alignable (Normal+Chimeric Paired): 37,506,154 (92.87%)
Unique Reads: 36,279,776 (89.83%)
PCR Duplicates: 178,143 (0.44%)
Optical Duplicates: 1,048,235 (2.60%)
Library Complexity Estimate: 3,718,491,625
Intra-fragment Reads: 0 (0.00% / 0.00%)
Below MAPQ Threshold: 5,594,124 (13.85% / 15.42%)
Hi-C Contacts: 30,685,652 (75.98% / 84.58%)
 Ligation Motif Present: 0  (0.00% / 0.00%)
 3' Bias (Long Range): 0% - 0%
 Pair Type intra chrom %(L-I-O-R): 4% - 88% - 4% - 4%
 Pair Type inter chrom %(L-I-O-R): 25% - 25% - 25% - 25%
 DE: 75%
 Cis/all (FF and RR orient): 57.1%
Inter-chromosomal: 3,343,207  (8.28% / 9.22%)
Intra-chromosomal: 27,342,445  (67.70% / 75.37%)
Short Range (<20,000bp): 23,820,058  (58.98% / 65.66%)
Long Range (>20,000bp): 3,522,387  (8.72% / 9.71%)